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Department of Biochemistry

Faculty Details

Faculty

Dr Daniel Andrew Gideon

Assistant Professor,Biochemistry

daniel.gideon@sju.edu.in

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Faculty Details

ACADEMIC QUALIFICATION
Academic Degree Subject University Address of the University Rank/ Medals
PhD Biochemistry Vellore Institute of Technology Dharapadavedu, Katpadi, Vellore
PhD Details
Title of Thesis University / Institution University Address Date of Registration Date of Completion Details of papers published Current Status
Modulation of redox (heme) enzyme reactions by additives in diverse environments Vellore Institute of Technology Vellore 01-08-2009 13-06-2014 1. Andrew D (first author), Hager L, Manoj KM* (2011). The intriguing enhancement of chloroperoxidase mediated one-electron oxidations by azide, a known active-site ligand. Biochem. Biophys. Res. Commun. (Elsevier) 414: 646-649. 2. Gideon DA (first author), Kumari R, Lynn AM, Manoj KM* (2012). What is the functional role of N-terminal transmembrane helices in the metabolism mediated by liver microsomal cytochrome P450 and its reductase? Cell Biochem. Biophys. (Springer) 63: 35-45. Awarded
Post Doc Details
Institution Name Institution Address Start Date End Date Subject Outcome
Indian Institute of Science Bengaluru 01-04-2017 30-09-2017 Redox enzymes in tuberculosis completed
Indian Institute of Science Bengaluru 01-11-2014 31-07-2016 Redox enzymes in Mycobacterium Completed
Book Chapter Published
Article Title Book title Book editor Article pages No of Chapters Year ISBN Publisher Details
Exploring phospholipase D signalling in the Warburg effect and cancer Phospholipases in Physiology and Pathology - vol.2 Dr. Sajal Chakraborti 45-76 1 2023 978-0-323-95696-3; 9780323956871 Academic Press, Elsevier
Phospholipase signalling in inflammation and promiscuity of phospholipase active-site ligands Phospholipases in Physiology and Pathology vol.6 Dr. Sajal Chakraborti 309-334 1 2023 978-0-443-15177-4 Academic Press, Elsevier
Systems biology approaches to unveiling the expression of phospholipases in various types of cancers Phospholipases in physiology and pathology vol.6 Dr, Sajal Chakraborti 271-306 1 2023 978-0-443-15177-4 Academic Press, Elsevier
Efficacy of Synthetic Organic Molecule Inhibitors of TRAF2 and NCK-Interacting Kinase (TNIK) Against Handbook of Oxidative Stress in Cancer: Therapeutic Aspects, Dr. Sajal Chakraborti 1-27 1 2022 978-9811654213 Springer Nature
Herbal Medicinal Compounds and Their Anti–Breast Cancer Actions Phytopharmaceuticals and Biotechnology of Herbal Plants Dr. Sachidanand Singh, Rahul Datta, Parul Johri, Mala Trivedi https://doi.org/10.1201/b22917 1 2022 9781003294023 CRC Press, Taylor & Francis
Workflow and Methods of In Silico Analysis of Compounds Isolated From Medicinal Plants: An Overview Phytopharmaceuticals and Biotechnology of Herbal Plants Dr. Sachidanand Singh, Rahul Datta, Parul Johri, Mala Trivedi 281-305 1 2022 9781003294023 CRC Press, Taylor & Francis
Synergism between Anticancer Drug and Seaweed Metabolites for Cancer Treatment Phytopharmaceuticals and Biotechnology of Herbal Plants Sachidanand Singh, Rahul Datta, Parul Johri, Mala Trivedi 386 1 2022 9781003294023 CRC Press, Taylor & Francis
Assessing the Contributions of Lipid Profile and Oxidative Lipid Damage to Carcinogenesis Handbook of Oxidative Stress and Cancer Sajal Chakraborti, Bimal K. Ray, Susanta Roychoudhury pp 805–819 1 2021 978-981-15-9410-6 Springer Nature Publishers
Iron Sulfur Clusters and ROS in Cancer Handbook of Oxidative Stress in Cancer: Mechanistic Aspects. Chakraborti, S., Ray, B.K., Roychoudhury, S. pp 291–306 1 2021 978-981-15-9410-6 Springer Nature
Immunomodulatory algal metabolites for alleviating inflammation and cancer Handbook of Oxidative Stress and Cancer: Therapeutic Aspects Dr. Sajal Chakraborti 443-463 1 2021 978-9811654213 Springer Nature,
Evaluation of the biological activities of isatin-based compounds against cancer Handbook of Oxidative Stress and Cancer: Therapeutic Aspects Chakraborti, S pp 1–25 1 2021 978-981-16-1247-3 Springer
Publications
Title Journal Name Year DOI/URL Your authorial position How many authors Clarivate IF
Recent advances in green synthesized nanoparticles for bactericidal and wound healing applications Heliyon 2023 https://doi.org/10.1016/j.heliyon.2023.e13128 Other 9 4.0
Murburn concept in cellular function and bioenergetics, Part 2: Understanding integrations-translations from molecular to macroscopic levels AIP Advances 2023 https://doi.org/10.1063/5.0171860 Other 6 1.697
Editorial: Redox control of plant metabolism and biofuel production (GUEST EDITOR) Frontiers in Plant Science 2023 https://doi.org/10.3389/fpls.2023.1244229 2nd 4 5.6
Deciphering the influence of soil and feed on the nutritional status of ruminants in rainfed areas using metagenomic analysis Journal of King Saud University - Science 2023 https://doi.org/10.1016/j.jksus.2023.102601 Other 10 3.8
Structural foundations for explaining the physiological roles of murzymes embedded in diverse phospholipid membranes Biochimica et Biophysica Acta Biomembranes 2022 https://doi.org/10.1016/j.bbamem.2022.183981 2nd and corresponding 2 3.4
Murburn model of vision: Precepts and proof of concept Journal of Cellular Physiology 2022 https://doi.org/10.1002/jcp.30786 Other 7 5.6
In silico molecular docking approach and in vitro cytotoxic, antioxidant, antimicrobial and anti-inflammatory activity of Ixora brachiata Roxb Process Biochemistry 2022 https://doi.org/10.1016/j.procbio.2022.11.014 Other 7 4.4
Na,K-ATPase: A murzyme facilitating thermodynamic equilibriums at the membrane-interface Journal of Cellular Physiology 2022 https://doi.org/10.1002/jcp.30925 2nd 7 5.6
Structural Modeling of Drosophila melanogaster Gut Cytochrome P450s and Docking Comparison of Fruit Fly Gut and Human Cytochrome P450s Current Drug Metabolism 2022 https://doi.org/10.2174/1389200223666220511162234 Corresponding 7 3.4
Interaction of membrane-embedded cytochrome b-complexes with quinols: Classical Q-cycle and murburn model Cell Biochemistry and Function 2022 https://doi.org/10.1002/cbf.3682 2nd 3 3.6
Deciphering the pharmacological potentials of Aganosma cymosa (Roxb.) G. Don using in vitro and computational methods Process Biochemistry 2022 https://doi.org/10.1016/j.procbio.2022.01.024 2nd 6 4.4
Structure-function correlations and system dynamics in oxygenic photosynthesis: classical perspectives and murburn precepts Journal of Biomolecular Structure and Dynamics 2021 https://doi.org/10.1080/07391102.2021.1953607 Other 6 4.4
In silico evaluation of isatin-based derivatives with RNA-dependent RNA polymerase of the novel coronavirus SARS-CoV-2 Journal of Biomolecular Structure and Dynamics 2021 https://doi.org/10.1080/07391102.2021.1890223 1st 8 4.4
Why do cells need oxygen? Insights from mitochondrial composition and function Cell Biology International 2021 https://doi.org/10.1002/cbin.11746 2nd 3 3.9
Murburn precepts for lactic-acidosis, Cori cycle, and Warburg effect: Interactive dynamics of dehydrogenases, protons, and oxygen Journal of Cellular Physiology 2021 https://doi.org/10.1002/jcp.30661 Corresponding 5 5.6
Validating the predictions of murburn model for oxygenic photosynthesis: Analyses of ligand-binding to protein complexes and cross-system comparisons Journal of Biomolecular Structure and Dynamics 2021 https://doi.org/10.1080/07391102.2021.1953607 2nd 7 4.4
Mechanism of electron transfers mediated by cytochromes c and b5 in mitochondria and endoplasmic reticulum: classical and murburn perspectives Journal of Biomolecular Structure and Dynamics 2021 https://doi.org/10.1080/07391102.2021.1925154 1st and corresponding 5
Hemoglobin catalyzes ATP-synthesis in human erythrocytes: a murburn model Journal of Biomolecular Structure and Dynamics 2021 https://doi.org/10.1080/07391102.2021.1925592 Other 4 4.4
What is the Role of Lipid Membrane-embedded Quinones in Mitochondria and Chloroplasts? Chemiosmotic Q-cycle versus Murburn Reaction Perspective Cell Biochemistry and Biophysics 2020 https://doi.org/10.1007/s12013-020-00945-y 2nd 3 2.6
Acute toxicity of cyanide in aerobic respiration: Theoretical and experimental support for murburn explanation Biomolecular Concepts 2020 https://doi.org/10.1515/bmc-2020-0004 Other 7 3.2 SCOPUS
p-TSA. H2O mediated one-pot, multi-component synthesis of isatin derived imidazoles as dual-purpose drugs against inflammation and cancer Bioorganic Chemistry 2020 https://doi.org/10.1016/j.bioorg.2020.104046 Other 6 5.1
Are plastocyanin and ferredoxin specific electron carriers or generic redox capacitors? Classical and murburn perspectives on two photosynthetic proteins Journal of biomolecular Structure & Dynamics 2020 https://doi.org/10.1080/07391102.2020.1835715 1st and corresponding 3 4.4
2020: murburn concept heralds a new era in cellular bioenergetics Biomedical Reviews 2019 http://dx.doi.org/10.14748/bmr.v30.6390 1st 3
Chemiosmotic and murburn explanations for aerobic respiration: Predictive capabilities, structure-function correlations and chemico-physical logic Archives of Biochemistry and Biophysics 2019 https://doi.org/10.1016/j.abb.2019.108128 Other 10 3.9
MURBURN SCHEME FOR MITOCHONDRIAL THERMOGENESIS Biomedical Reviews 2018 http://dx.doi.org/10.14748/bmr.v29.5852 1st 3
Murburn Concept: A Molecular Explanation for Hormetic and Idiosyncratic Dose Responses Dose Response 2018 https://doi.org/10.1177%2F1559325818774421 2nd 3 2.5
Atypical profiles and modulations of heme-enzymes catalyzed outcomes by low amounts of diverse additives suggest diffusible radicals' obligatory involvement in such redox reactions Biochimie 2016 Corresponding 12 3.9
Electron transfers amongst flavo- and 1 hemo- proteins: Diffusible species effect the relay processes, not protein-protein binding. RSC Advances 2016 https://doi.org/10.1039/C5RA26122H Other 4 3.9
A rapid method to assess reactive oxygen species in yeast using H2DCF-DA Analytical Methods RSC 2015 https://doi.org/10.1039/C5AY02278A 2nd 7 3.1
Cyanide does more to inhibit heme enzymes, than merely serving as an active-site ligand Biochemical and Biophysical Research Communications 2014 https://doi.org/10.1016/j.bbrc.2014.10.137 Other 4 3.1
What is the Functional Role of N-terminal Transmembrane Helices in the Metabolism Mediated by Liver Microsomal Cytochrome P450 and its Reductase? Cell Biochemistry and Biophysics 2012 https://doi.org/10.1007/s12013-012-9339-0 1st 4 2.6
The intriguing enhancement of chloroperoxidase mediated one-electron oxidations by azide, a known active-site ligand Biochemical and Biophysical Research Communications 2011 10.1016/j.bbrc.2011.10.128 1st 3 3.1

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